Initial release of nf-core/proteinannotator, created with the nf-core template.

• #68 - Using the ARIA2 and UNTAR nf-core modules to download and decompress the InterProScan database. (by @vagkaratzas)
• #67 - Swapped to the updated, non-buggy, nf-core version of INTERPROSCAN. (by @vagkaratzas)
• #65 - Converted the pipeline schematic to nf-core metromap. (by @vagkaratzas)
• #62 - Added the option to download and use the latest FunFam HMM library (or use path to an existing one) for domain annotation. (by @vagkaratzas)
• #61 - Added nf-core modules ARIA2 and HMMER_HMMSEARCH to download latest Pfam HMM library (or use path to existing one) and match domains to input sequences. (by @vagkaratzas)
• #60 - Added nf-core module S4PRED_RUNMODEL for secondary structure prediction (i.e., α-helix, a β-strand or a coil). (by @vagkaratzas)
• #59 - Added nf-core qc and pre-processing subworkflow for amino acid sequences FAA_SEQFU_SEQKIT. (by @vagkaratzas)
• #57 - nf-core tools template update to 3.5.1. (by @vagkaratzas)
• #52 - Add option to turn off InterProScan for testing. (by @edmundmiller, @olgabot)
• #51 - Update to nf-core/tools v3.3.1. (by @olgabot)
• #47 - Update metromap with more tools added from May 2025 Hackathon. (by @olgabot)
• #42 - Updated to nf-test on GitHub Actions and in the PULL_REQUEST_TEMPLATE.md. (by @olgabot)
• #13 - Add nf-core seqkit/stats module. (by @olgabot, @heuermh)
• #9 - Added InterProScan module - local version. (by @olgabot, @heuermh, @eweizy)